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SHODHAKA Life Sciences Pvt. Ltd.

         Illustrative Project List                       Publications                       Why us?

Key areas of services offered

Data Analysis Services

Workshops and Training




Illustrative Project List
  • Developing databases and performing gene expression1 analysis using microarray1 and RNA sequencing1 data [multiple projects and collaborations; 3 of the collaborative work published]
  • Metagenomics1 analysis of sequencing data from NGS & Sanger's method in the context of human gut microbiome [completed for a medical research group in India]
  • Reference and de novo genome sequence1 assembly, gene annotations (miRNA included), phylogenetic analysis of raw genome sequence reads [multiple projects]
  • miRNA (microarray)1 data analysis [completed for a research group at CCMB, Hyderabad, India]
  • Exon-array (Affymetrix)1 data analysis for brain tissue [completed for a research group at CCMB, Hyderbad, India]
  • CHiP-seq1 data analysis [completed for a research group at KMIO, Bengaluru, India]
  • Primer and mutation1 analysis in the context of oral cancer [completed for a company, Malaysia]
  • Protein interaction and pathway analysis applied to mass spec and microarray data in the context of a human disease [completed for an academic research group, Mumbai, India]
  • Development of a novel meta-analysis algorithm to make use of different types of gene expression data [in-house]
  • Development of a new computational platform for protein-interaction analysis [in-house]
  • Development of new RNA-protein interaction database by biocuration [in-house]
  • Development of online test system for screening candidates for course/job-suitability in the area of life sciences [in-house]
  • Development of a software for compiling hits obtained by literature search across multiple important resources [in-house]
  • Development of a portal for majority of bioinformatics resources as a guide for biologists [in-house: please visit  www.startbioinfo.com for more details]
  • Computational structural analysis to screen and dock ligands [collaboration with VIT, Tamilnadu, India; published]
1We can also carry out some of the initial wet-lab work (purifications, quality checks etc) or any other molecular biology laboratory work, in some cases, with the help of our collaborating companies.


Publications

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